~ruther/guix-local

325c039c1da3f7686d8b1456427eea8fdca92d05 — Roel Janssen 8 years ago c0ac72e
gnu: Add r-sparql.

* gnu/packages/bioinformatics.scm (r-sparql): New variable.
1 files changed, 23 insertions(+), 0 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +23 -0
@@ 6137,6 6137,29 @@ data.  It is derived from the UCSC hg19 genome and based on the \"knownGene\"
track.  The database is exposed as a @code{TxDb} object.")
    (license license:artistic2.0)))

(define-public r-sparql
  (package
  (name "r-sparql")
  (version "1.16")
  (source (origin
           (method url-fetch)
           (uri (cran-uri "SPARQL" version))
           (sha256
            (base32
             "0gak1q06yyhdmcxb2n3v0h9gr1vqd0viqji52wpw211qp6r6dcrc"))))
  (properties `((upstream-name . "SPARQL")))
  (build-system r-build-system)
  (propagated-inputs
   `(("r-rcurl" ,r-rcurl)
     ("r-xml" ,r-xml)))
  (home-page "http://cran.r-project.org/web/packages/SPARQL")
  (synopsis "SPARQL client for R")
  (description "This package provides an interface to use SPARQL to pose
SELECT or UPDATE queries to an end-point.")
  ;; The only license indication is found in the DESCRIPTION file,
  ;; which states GPL-3.  So we cannot assume GPLv3+.
  (license license:gpl3)))

(define-public vsearch
  (package
    (name "vsearch")