1 files changed, 0 insertions(+), 102 deletions(-)

M gnu/packages/python-science.scm

@@ 3582,108 3582,6 @@ library.")
 tissue-specificity metrics for gene expression.")
     (license license:gpl3+)))
 
-(define-public python-pandas-1
-  (package
-    (name "python-pandas")
-    (version "1.5.3")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (pypi-uri "pandas" version))
-       (sha256
-        (base32 "1cdhngylzh352wx5s3sjyznn7a6kmjqcfg97hgqm5h3yb9zgv8vl"))))
-    (build-system pyproject-build-system)
-    (arguments
-     (list
-      #:test-flags
-      '(list "--pyargs" "pandas"
-             "-n" (number->string (parallel-job-count))
-             "-m" "not slow and not network and not db"
-             "-k"
-             (string-append
-              ;; TODO: Missing input
-              "not TestS3"
-              " and not s3"
-              ;; No module named 'pandas.io.sas._sas'
-              " and not test_read_expands_user_home_dir"
-              " and not test_read_non_existent"
-              ;; Unknown failures
-              " and not test_switch_options"
-              ;; These fail with: td64 doesn't return NotImplemented, see numpy#17017
-              " and not test_nat_comparisons"
-              ;; Crashes
-              " and not test_bytes_exceed_2gb"
-              ;; get_subplotspec() returns None; possibly related to
-              ;; https://github.com/pandas-dev/pandas/issues/54577
-              " and not test_plain_axes"
-              ;; This test fails when run with pytest-xdist
-              ;; (see https://github.com/pandas-dev/pandas/issues/39096).
-              " and not test_memory_usage"))
-      #:phases
-       #~(modify-phases %standard-phases
-           (add-after 'unpack 'patch-build-system
-             (lambda _
-               (substitute* "pyproject.toml"
-                 ;; Not all data files are distributed with the tarball.
-                 (("--strict-data-files ") "")
-                 ;; Unknown property "asyncio_mode"
-                 (("asyncio_mode = \"strict\"") ""))))
-           (add-after 'unpack 'patch-which
-             (lambda* (#:key inputs #:allow-other-keys)
-               (substitute* "pandas/io/clipboard/__init__.py"
-                 (("^WHICH_CMD = .*")
-                  (string-append "WHICH_CMD = \""
-                                 (search-input-file inputs "/bin/which")
-                                 "\"\n")))))
-           (add-before 'check 'prepare-x
-             (lambda _
-               (system "Xvfb &")
-               (setenv "DISPLAY" ":0")
-               ;; xsel needs to write a log file.
-               (setenv "HOME" "/tmp")))
-           ;; The compiled libraries are only in the output at this point,
-           ;; but they are needed to run tests.
-           ;; FIXME: This should be handled by the pyargs pytest argument,
-           ;; but is not for some reason.
-           (add-before 'check 'pre-check
-             (lambda* (#:key inputs outputs #:allow-other-keys)
-               (copy-recursively
-                (string-append (site-packages inputs outputs)
-                               "/pandas/_libs")
-                "pandas/_libs"))))))
-    (propagated-inputs
-     (list python-jinja2
-           python-matplotlib
-           python-numpy
-           python-openpyxl
-           python-pytz
-           python-dateutil
-           python-xlrd
-           python-xlsxwriter))
-    (inputs
-     (list which xclip xsel))
-    (native-inputs
-     (list python-cython-0.29.35
-           python-beautifulsoup4
-           python-lxml
-           python-html5lib
-           python-pytest
-           python-pytest-mock
-           python-pytest-xdist
-           python-setuptools
-           python-wheel
-           ;; Needed to test clipboard support.
-           xorg-server-for-tests))
-    (home-page "https://pandas.pydata.org")
-    (synopsis "Data structures for data analysis, time series, and statistics")
-    (description
-     "Pandas is a Python package providing fast, flexible, and expressive data
-structures designed to make working with structured (tabular,
-multidimensional, potentially heterogeneous) and time series data both easy
-and intuitive.  It aims to be the fundamental high-level building block for
-doing practical, real world data analysis in Python.")
-    (license license:bsd-3)))
-
 (define-public python-pandas-2
   (package
     (name "python-pandas")