~ruther/guix-local

2301fd3e4d3d1789f63e19d9f46146e157d7e610 — Ricardo Wurmus 9 years ago 2d21d44
gnu: Add r-genefilter.

* gnu/packages/bioinformatics.scm (r-genefilter): New variable.
1 files changed, 26 insertions(+), 0 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +26 -0
@@ 5099,6 5099,32 @@ microarrays.")
     "This package provides functions for plotting genomic data.")
    (license license:artistic2.0)))

(define-public r-genefilter
  (package
    (name "r-genefilter")
    (version "1.54.2")
    (source
     (origin
       (method url-fetch)
       (uri (bioconductor-uri "genefilter" version))
       (sha256
        (base32
         "1hmz6as0njvrsrdbgmk72jyclnnqvfdvp6kqv456h43ldq2ajfv5"))))
    (build-system r-build-system)
    (native-inputs
     `(("gfortran" ,gfortran)))
    (propagated-inputs
     `(("r-annotate" ,r-annotate)
       ("r-annotationdbi" ,r-annotationdbi)
       ("r-biobase" ,r-biobase)
       ("r-s4vectors" ,r-s4vectors)))
    (home-page "http://bioconductor.org/packages/genefilter")
    (synopsis "Filter genes from high-throughput experiments")
    (description
     "This package provides basic functions for filtering genes from
high-throughput sequencing experiments.")
    (license license:artistic2.0)))

(define-public vsearch
  (package
    (name "vsearch")