~ruther/guix-local

21ce20bd2f31a016a7f777c165e9ac11848e5f0b — Maxim Cournoyer 5 years ago 3c0b373 
gnu: python-scanpy: Do not set PYTHONPATH.

* gnu/packages/bioinformatics.scm (python-scanpy)[phases]
{check}: Do not set PYTHONPATH.
patch browse .tar.gz .zip 
1 files changed, 1 insertions(+), 5 deletions(-)

M gnu/packages/bioinformatics.scm

M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +1 -5
@@ 12924,11 12924,7 @@ in RNA-seq data.")
             (delete-file "scanpy/tests/test_preprocessing.py")
             (delete-file "scanpy/tests/test_read_10x.py")

             (setenv "PYTHONPATH"
                     (string-append (getcwd) ":"
                                    (getenv "PYTHONPATH")))
             (invoke "pytest")
             #t)))))
             (invoke "pytest"))))))
    (propagated-inputs
     `(("python-anndata" ,python-anndata)
       ("python-h5py" ,python-h5py)