gnu: python-reproject: Improve package. * gnu/packages/astronomy.scm (python-reproject): Update to 0.14.1. [arguments] <test-flags>: Limit to 8 threads to relax load on host machine running them. <phases>: Remove 'create-setup.py, writable-compiler, 'prepare-test-environment; use custom 'check. [inputs]: Add python-asdf, python-gwcs, python-pyvo, python-shapely, and python-sunpy-minimal. [propagated-inputs]: Remove python-asdf, python-gwcs, python-pyvo, and python-shapely. [native-inputs]: Remove python-cython-3, python-asdf, python-gwcs, python-pyvo, and python-wheel; add python-cython. Change-Id: Ie4d47ff47c120dca4ac1ab609e7bf142a9f181a0
1 files changed, 29 insertions(+), 43 deletions(-) M gnu/packages/astronomy.scm
M gnu/packages/astronomy.scm => gnu/packages/astronomy.scm +29 -43
@@ 7372,7 7372,7 @@ PSF} describing how the optical system spreads light from sources.") (define-public python-reproject (package (name "python-reproject") (version "0.14.1") (version "0.14.1") ;XXX: Newer versions need to be build with NumPy 2+ (source (origin (method url-fetch) @@ 7382,64 7382,50 @@ PSF} describing how the optical system spreads light from sources.") (build-system pyproject-build-system) (arguments (list ;; tests: 2062 passed, 398 skipped, 3 warnings #:test-flags #~(list "--arraydiff" "--arraydiff-default-format=fits" "--numprocesses" (number->string (parallel-job-count)) "--pyargs" "reproject") "--numprocesses" (number->string (min 8 (parallel-job-count))) "--pyargs" "reproject" ;; ValueError: Could not determine celestial frame corresponding ;; to the specified WCS object "-k" "not test_solar_wcs") #:phases #~(modify-phases %standard-phases ;; setup.py was removed in a659a260bdd7635cddc8f33c4ea04a3b6d8c1f84 ;; for some unknown reason, which caused the package to fail to ;; build. It is being recreated based on that commit. ;; TODO: Check how to implement it in python-build-system. (add-after 'unpack 'create-setup.py (lambda _ (call-with-output-file "setup.py" (lambda (port) (format port "from setuptools import setup from extension_helpers import get_extensions setup(ext_modules=get_extensions())"))))) (add-before 'install 'writable-compiler (lambda _ (make-file-writable "reproject/_compiler.c"))) (add-before 'check 'writable-compiler (lambda _ (make-file-writable "reproject/_compiler.c"))) (add-before 'check 'prepare-test-environment (lambda _ (setenv "HOME" "/tmp") ;; Cython extensions have to be built before running the tests. (invoke "python" "setup.py" "build_ext" "--inplace")))))) (propagated-inputs ;; Use built library for tests. (replace 'check (lambda* (#:key tests? test-flags #:allow-other-keys) (when tests? (with-directory-excursion #$output (setenv "HOME" "/tmp") (apply invoke "pytest" "-vv" test-flags)))))))) (native-inputs (list python-cython python-extension-helpers python-pytest-astropy python-pytest-xdist python-setuptools-scm)) (inputs (list python-asdf python-astropy python-gwcs python-pyvo python-shapely python-sunpy-minimal)) (propagated-inputs (list python-astropy python-astropy-healpix python-cloudpickle python-dask python-fsspec python-gwcs python-numpy python-pyvo python-scipy python-shapely python-zarr)) (native-inputs (list python-cython python-extension-helpers python-asdf python-gwcs python-pytest-astropy python-pytest-xdist python-pyvo ;; python-sunpy ; circular dependencies, test optional python-setuptools-scm python-wheel)) (home-page "https://reproject.readthedocs.io") (synopsis "Astronomical image reprojection in Python") (description "This package provides a functionality to reproject astronomical images using various techniques via a uniform interface, where reprojection is the "This package provides a functionality to reproject astronomical images using various techniques via a uniform interface, where reprojection is the re-gridding of images from one world coordinate system to another e.g. changing the pixel resolution, orientation, coordinate system.") (license license:bsd-3)))