~ruther/guix-local

1ff1103e9b2f1801e5f5f4676d1ad0dfb935cf2c — Ricardo Wurmus 2 months ago 1a12ac9 
gnu: r-microbiomestat: Update to 1.3.

* gnu/packages/bioconductor.scm (r-microbiomestat): Update to 1.3.
[properties]: Record updater-extra-inputs and updater-extra-native-inputs.
[inputs]: Add nlopt.
[native-inputs]: Add pkg-config.
[propagated-inputs]: Add r-bbmisc, r-dplyr, r-foreach, r-lhs, r-mlr, r-mlrmbo,
r-paramhelpers, r-rcpp, r-rcpparmadillo, and r-smoof.

Change-Id: Ia326065121daeacb364ab07e82d4435f228f01f7
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
patch browse .tar.gz 
1 files changed, 19 insertions(+), 5 deletions(-)

M gnu/packages/bioconductor.scm

M gnu/packages/bioconductor.scm => gnu/packages/bioconductor.scm +19 -5
@@ 1,5 1,5 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015-2025 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015-2026 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016, 2017, 2018, 2020, 2021 Roel Janssen <roel@gnu.org>
;;; Copyright © 2016 Pjotr Prins <pjotr.guix@thebird.nl>
;;; Copyright © 2016 Ben Woodcroft <donttrustben@gmail.com>


@@ 18515,23 18515,37 @@ standardization of the analyses and the development of best practices.")
(define-public r-microbiomestat
  (package
    (name "r-microbiomestat")
    (version "1.2")
    (version "1.3")
    (source (origin
              (method url-fetch)
              (uri (cran-uri "MicrobiomeStat" version))
              (sha256
               (base32
                "1kpc68sl63k104xy7r6f3gxan0yx0rs7ksn8ldbq8xla00ddflgq"))))
    (properties `((upstream-name . "MicrobiomeStat")))
                "02xg8l4d0z5wrdrm5dj5a0q51vsbhf3f6z2lk8294c4d85s09dhl"))))
    (properties
     '((upstream-name . "MicrobiomeStat")
       (updater-extra-inputs . ("nlopt"))
       (updater-extra-native-inputs . ("pkg-config"))))
    (build-system r-build-system)
    (propagated-inputs (list r-foreach
    (inputs (list nlopt))
    (native-inputs (list pkg-config))
    (propagated-inputs (list r-bbmisc
                             r-dplyr
                             r-foreach
                             r-ggplot2
                             r-ggrepel
                             r-lhs
                             r-lmertest
                             r-mass
                             r-matrix
                             r-matrixstats
                             r-mlr
                             r-mlrmbo
                             r-modeest
                             r-paramhelpers
                             r-rcpp
                             r-rcpparmadillo
                             r-smoof
                             r-statmod))
    (home-page "https://cran.r-project.org/package=MicrobiomeStat")
    (synopsis "Statistical methods for microbiome compositional data")