~ruther/guix-local

10664fcc8c557a33a6670db8fb2ecec8eaa68d0d — Ricardo Wurmus 5 years ago 579f313
gnu: python-biopython: Update to 1.76.

* gnu/packages/bioinformatics.scm (python-biopython): Update to 1.76.
(python-biopython-1.73): New variable.
(instrain)[inputs]: Replace python-biopython with python-biopython-1.73.
1 files changed, 15 insertions(+), 3 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +15 -3
@@ 1245,14 1245,14 @@ sequencing.")
(define-public python-biopython
  (package
    (name "python-biopython")
    (version "1.73")
    (version "1.76")
    (source (origin
              (method url-fetch)
              ;; use PyPi rather than biopython.org to ease updating
              (uri (pypi-uri "biopython" version))
              (sha256
               (base32
                "1q55jhf76z3k6is3psis0ckbki7df26x7dikpcc3vhk1vhkwribh"))))
                "0wlch9xpa0fpgjzyxi6jsfca6iakaq9a05927xg8vqnmvaccnwrq"))))
    (build-system python-build-system)
    (arguments
     `(#:phases


@@ 1273,6 1273,18 @@ dealing with alignments; code making it easy to split up parallelizable tasks
into separate processes; and more.")
    (license (license:non-copyleft "http://www.biopython.org/DIST/LICENSE"))))

(define-public python-biopython-1.73
  (package
    (inherit python-biopython)
    (version "1.73")
    (source (origin
              (method url-fetch)
              ;; use PyPi rather than biopython.org to ease updating
              (uri (pypi-uri "biopython" version))
              (sha256
               (base32
                "1q55jhf76z3k6is3psis0ckbki7df26x7dikpcc3vhk1vhkwribh"))))))

(define-public python2-biopython
  (package-with-python2 python-biopython))



@@ 11730,7 11742,7 @@ set.")
               (("from job_utils")
                "from .job_utils")))))))
    (inputs
     `(("python-biopython" ,python-biopython)
     `(("python-biopython" ,python-biopython-1.73)
       ("python-boto3" ,python-boto3)
       ("python-h5py" ,python-h5py)
       ("python-lmfit" ,python-lmfit)