~ruther/guix-local

01ec7c388323723869b3d731025d3b2526dcb5d9 — David Elsing 2 years ago 24518d0 
gnu: gemmi: Update to 0.6.4.

* gnu/packages/chemistry.scm (gemmi): Update to 0.6.4.
[arguments]: Adjust include/gemmi/sprintf.hpp -> src/sprintf.cpp.
(freesasa)[arguments]: Link to gemmi_cpp explicitly.

Signed-off-by: Christopher Baines <mail@cbaines.net>
patch browse .tar.gz 
1 files changed, 4 insertions(+), 4 deletions(-)

M gnu/packages/chemistry.scm

M gnu/packages/chemistry.scm => gnu/packages/chemistry.scm +4 -4
@@ 589,7 589,7 @@ your colleagues, or to generate pre-rendered animations.")
(define-public gemmi
  (package
    (name "gemmi")
    (version "0.5.7")
    (version "0.6.4")
    (source (origin
              (method git-fetch)
              (uri (git-reference


@@ 598,7 598,7 @@ your colleagues, or to generate pre-rendered animations.")
              (file-name (git-file-name name version))
              (sha256
               (base32
                "00km5q726bslrw7xbfwb3f3mrsk19qbimfnl3hvr4wi1y3z8i18a"))
                "0wciqqswc4p4v4kglfv36gnvyyimqn4lnywdzd0pgrjn443i860y"))
              (patches
               (search-patches "gemmi-fix-sajson-types.patch"
                               "gemmi-fix-pegtl-usage.patch"))


@@ 625,7 625,7 @@ your colleagues, or to generate pre-rendered animations.")
      #~(modify-phases %standard-phases
          (add-after 'unpack 'patch-includes
            (lambda _
              (substitute* (list "include/gemmi/sprintf.hpp"
              (substitute* (list "src/sprintf.cpp"
                                 "include/gemmi/dirwalk.hpp"
                                 "include/gemmi/cif.hpp"
                                 "include/gemmi/json.hpp"


@@ 722,7 722,7 @@ It can be used for working with
                (("libfreesasa\\.a") "libfreesasa.la")
                (("freesasa_LDADD \\+= libfreesasa\\.la" prev)
                 (string-append prev "\nlibfreesasa_la_LIBADD"
                                " = -ljson-c ${libxml2_LIBS}\n"))
                                " = -ljson-c -lgemmi_cpp ${libxml2_LIBS}\n"))
                (("_a_SOURCES") "_la_SOURCES"))
              (substitute* "configure.ac"
                (("AC_PROG_INSTALL" inst)