~ruther/guix-local

002d6e4109f43d38d09bfdfc91711fdab31c3d4e — Kjartan Oli Agustsson 1 year, 13 days ago 5853163
gnu: python-velocyto: Run guix style

* gnu/packages/bioinformatics.scm (python-velocyto): Run guix style.

Change-Id: Ieda2b56cf13ae519e539ecef286ef63595532a7a
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
1 files changed, 20 insertions(+), 26 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +20 -26
@@ 21483,36 21483,30 @@ deleted.")
       (method url-fetch)
       (uri (pypi-uri "velocyto" version))
       (sha256
        (base32
         "0fgygyzqgrq32dv6a00biq1p1cwi6kbl5iqblxq1kklj6b2mzmhs"))
        (base32 "0fgygyzqgrq32dv6a00biq1p1cwi6kbl5iqblxq1kklj6b2mzmhs"))
       (modules '((guix build utils)))
       ;; Delete generated C files.
       (snippet
        '(for-each delete-file (find-files "." "\\.c")))))
       (snippet '(for-each delete-file
                           (find-files "." "\\.c")))))
    (build-system pyproject-build-system)
    (arguments
     '(#:phases
       (modify-phases %standard-phases
         ;; Numba needs a writable dir to cache functions.
         (add-before 'check 'set-numba-cache-dir
           (lambda _
             (setenv "NUMBA_CACHE_DIR" "/tmp"))))))
    (native-inputs
     (list python-joblib
           python-setuptools
           python-wheel))
    (propagated-inputs
     (list python-click
           python-cython
           python-h5py
           python-loompy
           python-matplotlib
           python-numba
           python-numpy
           python-pandas
           python-pysam
           python-scikit-learn
           python-scipy))
     '(#:phases (modify-phases %standard-phases
                  ;; Numba needs a writable dir to cache functions.
                  (add-before 'check 'set-numba-cache-dir
                    (lambda _
                      (setenv "NUMBA_CACHE_DIR" "/tmp"))))))
    (native-inputs (list python-joblib python-setuptools python-wheel))
    (propagated-inputs (list python-click
                             python-cython
                             python-h5py
                             python-loompy
                             python-matplotlib
                             python-numba
                             python-numpy
                             python-pandas
                             python-pysam
                             python-scikit-learn
                             python-scipy))
    (home-page "https://github.com/velocyto-team/velocyto.py")
    (synopsis "RNA velocity analysis for single cell RNA-seq data")
    (description